PSME_00003840-RA

Description : (at1g56120 : 313.0) Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT1G56130.1); Has 185204 Blast hits to 134213 proteins in 4803 species: Archae - 129; Bacteria - 16314; Metazoa - 50838; Fungi - 10579; Plants - 84868; Viruses - 447; Other Eukaryotes - 22029 (source: NCBI BLink). & (q8l4h4|nork_medtr : 209.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 626.0) & (original description: no original description)

Gene families : OG_42_0001198 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001198_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00003840-RA
Cluster	HCCA clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g29120	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.04	Orthogroups_2024-Update
GRMZM2G102862	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.02	Orthogroups_2024-Update
Glyma.11G205200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.04	Orthogroups_2024-Update
Glyma.11G205400	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.03	Orthogroups_2024-Update
Glyma.11G205600	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.02	Orthogroups_2024-Update
Glyma.11G206100	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.04	Orthogroups_2024-Update
Glyma.11G206700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.03	Orthogroups_2024-Update
Glyma.18G046100	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 2	0.04	Orthogroups_2024-Update
LOC_Os10g34220	No alias	TKL_IRAK_DUF26-lf.1 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
MA_10430458g0010	No alias	(at5g40380 : 105.0) Encodes a cysteine-rich...	0.08	Orthogroups_2024-Update
MA_10432080g0010	No alias	(at1g56120 : 323.0) Leucine-rich repeat transmembrane...	0.05	Orthogroups_2024-Update
MA_10435854g0010	No alias	(at1g70520 : 351.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
MA_13975g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_464469g0010	No alias	(at1g56120 : 199.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
MA_48745g0010	No alias	(at1g56120 : 322.0) Leucine-rich repeat transmembrane...	0.07	Orthogroups_2024-Update
MA_8050323g0010	No alias	(at1g70530 : 99.8) Encodes a cysteine-rich receptor-like...	0.03	Orthogroups_2024-Update
PSME_00003842-RA	No alias	(at1g70520 : 353.0) Encodes a cysteine-rich...	0.02	Orthogroups_2024-Update
PSME_00018894-RA	No alias	(at1g70520 : 383.0) Encodes a cysteine-rich...	0.05	Orthogroups_2024-Update
PSME_00036009-RA	No alias	(at1g70520 : 341.0) Encodes a cysteine-rich...	0.1	Orthogroups_2024-Update
PSME_00040790-RA	No alias	(at1g70520 : 301.0) Encodes a cysteine-rich...	0.08	Orthogroups_2024-Update
PSME_00044648-RA	No alias	(at5g40380 : 254.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
PSME_00045053-RA	No alias	(at1g56120 : 271.0) Leucine-rich repeat transmembrane...	0.07	Orthogroups_2024-Update
Seita.9G217600.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.001G215900.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Solyc11g011880	No alias	Protein kinase (AHRD V3.3 *** A9CM11_IPONI)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	280	556
IPR002902	GNK2	33	130

External Links

No external refs found!

PSME_00003840-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation