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  5. PSME_00003954-RA

PSME_00003954-RA


Description : (at3g15810 : 115.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0000492 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003954-RA
Cluster HCCA clusters: Cluster_18

Expression values normalized per gene (using the maximum value,
Target AliasDescription ECC score Gene Family Method Actions
A4A49_36021 No alias protein lurp-one-related 12 0.05 Orthogroups_2024-Update
A4A49_57737 No alias protein lurp-one-related 17 0.03 Orthogroups_2024-Update
At2g38640 No alias Protein LURP-one-related 8... 0.04 Orthogroups_2024-Update
At3g15810 No alias Protein LURP-one-related 12... 0.02 Orthogroups_2024-Update
Bradi1g71120 No alias Protein of unknown function (DUF567) 0.02 Orthogroups_2024-Update
Brara.B02524.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01957.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.C01958.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C03582.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G440009 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
Glyma.07G030300 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
Glyma.15G007500 No alias Protein of unknown function (DUF567) 0.05 Orthogroups_2024-Update
Glyma.20G028350 No alias Protein of unknown function (DUF567) 0.05 Orthogroups_2024-Update
HORVU1Hr1G069180.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g56450 No alias DUF567 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g60170 No alias DUF567 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10428043g0010 No alias (at2g38640 : 133.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
MA_177088g0010 No alias (at1g80120 : 146.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
MA_5775410g0010 No alias (at3g15810 : 82.0) Protein of unknown function (DUF567);... 0.03 Orthogroups_2024-Update
MA_901946g0010 No alias (at2g38640 : 106.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
MA_96968g0010 No alias (at1g80120 : 138.0) Protein of unknown function... 0.05 Orthogroups_2024-Update
PSME_00003956-RA No alias (at1g80120 : 145.0) Protein of unknown function... 0.01 Orthogroups_2024-Update
PSME_00004417-RA No alias (at3g15810 : 90.5) Protein of unknown function (DUF567);... 0.05 Orthogroups_2024-Update
PSME_00021053-RA No alias (at3g14260 : 112.0) Protein of unknown function... 0.05 Orthogroups_2024-Update
Potri.003G032500 No alias Protein of unknown function (DUF567) 0.04 Orthogroups_2024-Update
Seita.7G304500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Cytoscape.js
Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 16 208
No external refs found!