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  5. PSME_00003959-RA

PSME_00003959-RA


Description : (at1g02080 : 107.0) transcription regulators; FUNCTIONS IN: transcription regulator activity; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CCR4-Not complex component, Not1 (InterPro:IPR007196). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0004247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003959-RA
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
PSME_00020692-RA No alias (at1g02080 : 158.0) transcription regulators; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00027318-RA No alias (at1g02080 : 159.0) transcription regulators; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00033777-RA No alias (at1g02080 : 99.8) transcription regulators; FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00042014-RA No alias (at1g02080 : 243.0) transcription regulators; FUNCTIONS... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
InterPro domains Description Start Stop
IPR032194 CNOT1_HEAT 335 395
No external refs found!