1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00004021-RA

PSME_00004021-RA


Description : (at2g40240 : 122.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G56030.1); Has 20269 Blast hits to 5655 proteins in 178 species: Archae - 0; Bacteria - 4; Metazoa - 127; Fungi - 39; Plants - 19817; Viruses - 0; Other Eukaryotes - 282 (source: NCBI BLink). & (gnl|cdd|38754 : 93.2) no description available & (q76c99|rf1_orysa : 86.3) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0002497 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004021-RA
Cluster HCCA clusters: Cluster_196


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 671 718
IPR002885 Pentatricopeptide_repeat 600 628
No external refs found!