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  5. PSME_00004095-RA

PSME_00004095-RA


Description : (at2g28120 : 219.0) Major facilitator superfamily protein; INVOLVED IN: N-terminal protein myristoylation, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G39210.1); Has 3034 Blast hits to 2940 proteins in 680 species: Archae - 38; Bacteria - 1235; Metazoa - 42; Fungi - 225; Plants - 608; Viruses - 0; Other Eukaryotes - 886 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004095-RA
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
A4A49_27924 No alias protein nuclear fusion defective 4 0.02 Orthogroups_2024-Update
At5g50630 No alias Major facilitator superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g12440 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G185100 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G069980.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
Kfl00680_0080 kfl00680_0080_v1.1 (at5g14120 : 301.0) Major facilitator superfamily... 0.01 Orthogroups_2024-Update
PSME_00020952-RA No alias (at2g39210 : 423.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00034985-RA No alias (at2g39210 : 444.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00036859-RA No alias (at2g39210 : 228.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00053948-RA No alias (at2g39210 : 468.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 1 212
No external refs found!