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  5. PSME_00004152-RA

PSME_00004152-RA


Description : (at1g80930 : 879.0) MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: RNA binding, binding; INVOLVED IN: translation, RNA metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890), MIF4-like, type 1/2/3 (InterPro:IPR016021); BEST Arabidopsis thaliana protein match is: Initiation factor eIF-4 gamma, MA3 (TAIR:AT1G52325.1); Has 51676 Blast hits to 28577 proteins in 1484 species: Archae - 86; Bacteria - 5039; Metazoa - 22313; Fungi - 6500; Plants - 3817; Viruses - 357; Other Eukaryotes - 13564 (source: NCBI BLink). & (reliability: 1758.0) & (original description: no original description)


Gene families : OG_42_0002762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004152-RA
Cluster HCCA clusters: Cluster_47


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 640 746
No external refs found!