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  5. PSME_00004198-RA

PSME_00004198-RA


Description : (at1g23740 : 205.0) Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink). & (q8h0m1|qorh_spiol : 95.5) Chloroplastic quinone-oxidoreductase homolog (EC 1.-.-.-) (ceQORH) - Spinacia oleracea (Spinach) & (reliability: 410.0) & (original description: no original description)


Gene families : OG_42_0001781 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001781_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004198-RA
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
PSME_00016447-RA No alias (at1g23740 : 176.0) Oxidoreductase, zinc-binding... 0.06 Orthogroups_2024-Update
PSME_00035478-RA No alias (at1g23740 : 303.0) Oxidoreductase, zinc-binding... 0.07 Orthogroups_2024-Update
Solyc05g005480 No alias Quinone oxidoreductase-like protein (AHRD V3.3 *** W9RNB1_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!