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  5. PSME_00004276-RA

PSME_00004276-RA


Description : (at3g01015 : 107.0) TPX2 (targeting protein for Xklp2) protein family; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0001117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004276-RA
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
PSME_00008406-RA No alias (at5g15510 : 162.0) TPX2 (targeting protein for Xklp2)... 0.01 Orthogroups_2024-Update
PSME_00013569-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!