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  5. PSME_00004301-RA

PSME_00004301-RA


Description : (at5g13000 : 439.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 878.0) & (original description: no original description)


Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004301-RA
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
267830 No alias callose synthase 5 0.03 Orthogroups_2024-Update
At3g14780 No alias Callose synthase [Source:UniProtKB/TrEMBL;Acc:Q8GW77] 0.02 Orthogroups_2024-Update
GRMZM2G326643 No alias glucan synthase-like 8 0.03 Orthogroups_2024-Update
GRMZM2G471139 No alias glucan synthase-like 11 0.02 Orthogroups_2024-Update
Glyma.05G191600 No alias callose synthase 5 0.04 Orthogroups_2024-Update
Glyma.13G116450 No alias callose synthase 5 0.03 Orthogroups_2024-Update
Glyma.13G297100 No alias glucan synthase-like 5 0.05 Orthogroups_2024-Update
HORVU2Hr1G109970.1 No alias EC_2.4 glycosyltransferase & callose synthase 0.03 Orthogroups_2024-Update
Kfl00500_0040 kfl00500_0040_v1.1 (at2g13680 : 1902.0) Responsible for the synthesis of... 0.01 Orthogroups_2024-Update
Sopen07g030200 No alias 1,3-beta-glucan synthase component 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 298 399
No external refs found!