1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00004387-RA

PSME_00004387-RA


Description : (at3g14820 : 237.0) GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G59406.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 177.0) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 474.0) & (original description: no original description)


Gene families : OG_42_0000214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004387-RA
Cluster HCCA clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Brara.C04018.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g01980 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435924g0010 No alias (at2g04570 : 287.0) GDSL-like Lipase/Acylhydrolase... 0.05 Orthogroups_2024-Update
Sobic.002G141100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G001700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen05g026530 No alias GDSL-like Lipase/Acylhydrolase 0.03 Orthogroups_2024-Update
Sopen10g004620 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR001087 GDSL 237 379
No external refs found!