PSME_00004450-RA

Description : (at4g10780 : 156.0) LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00004450-RA
Cluster	HCCA clusters: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
At5g43730	No alias	Probable disease resistance protein At5g43730...	0.03	Orthogroups_2024-Update
Bradi2g52150	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi5g15560	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
MA_10427619g0010	No alias	(at1g69550 : 114.0) disease resistance protein...	0.04	Orthogroups_2024-Update
MA_10430184g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_122523g0010	No alias	(at1g12210 : 224.0) RFL1 has high sequence similarity to...	0.05	Orthogroups_2024-Update
MA_5183807g0010	No alias	(at4g10780 : 85.5) LRR and NB-ARC domains-containing...	0.04	Orthogroups_2024-Update
MA_53162g0020	No alias	(at5g43740 : 114.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
MA_549555g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_8325275g0010	No alias	(at1g12220 : 93.2) Resistance gene, mediates resistance...	0.03	Orthogroups_2024-Update
MA_8869735g0010	No alias	(at1g61300 : 128.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00011110-RA	No alias	(at5g43740 : 165.0) Disease resistance protein...	0.08	Orthogroups_2024-Update
PSME_00018989-RA	No alias	(at4g26090 : 240.0) Encodes a plasma membrane protein...	0.06	Orthogroups_2024-Update
PSME_00027915-RA	No alias	(at1g15890 : 191.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00033628-RA	No alias	(at4g27220 : 254.0) NB-ARC domain-containing disease...	0.04	Orthogroups_2024-Update
PSME_00037442-RA	No alias	(at1g15890 : 222.0) Disease resistance protein...	0.08	Orthogroups_2024-Update
PSME_00040363-RA	No alias	(at5g63020 : 222.0) Disease resistance protein...	0.05	Orthogroups_2024-Update
PSME_00041797-RA	No alias	(at1g12280 : 246.0) LRR and NB-ARC domains-containing...	0.04	Orthogroups_2024-Update
PSME_00045260-RA	No alias	(at1g12220 : 264.0) Resistance gene, mediates resistance...	0.06	Orthogroups_2024-Update
PSME_00050940-RA	No alias	(at1g12280 : 221.0) LRR and NB-ARC domains-containing...	0.04	Orthogroups_2024-Update
PSME_00057017-RA	No alias	(at1g12280 : 226.0) LRR and NB-ARC domains-containing...	0.04	Orthogroups_2024-Update
Potri.018G136301	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.T013900	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0010167	response to nitrate	IEP	Predicted GO
BP	GO:0015706	nitrate transport	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901698	response to nitrogen compound	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	312	400

External Links

No external refs found!

PSME_00004450-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation