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  5. PSME_00004481-RA

PSME_00004481-RA


Description : (at5g02230 : 276.0) Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), Pyrimidine 5-nucleotidase (InterPro:IPR010237), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G59480.1); Has 2249 Blast hits to 2246 proteins in 493 species: Archae - 16; Bacteria - 743; Metazoa - 0; Fungi - 143; Plants - 201; Viruses - 0; Other Eukaryotes - 1146 (source: NCBI BLink). & (reliability: 552.0) & (original description: no original description)


Gene families : OG_42_0000537 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004481-RA
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At2g32150 No alias At2g32150/F22D22.10 [Source:UniProtKB/TrEMBL;Acc:Q9SKY5] 0.03 Orthogroups_2024-Update
Bradi1g11620 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G182800 No alias Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.03 Orthogroups_2024-Update
MA_44944g0010 No alias (at5g02230 : 258.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
PSME_00006046-RA No alias (at5g02230 : 331.0) Haloacid dehalogenase-like hydrolase... 0.03 Orthogroups_2024-Update
PSME_00020314-RA No alias (at3g62040 : 197.0) Haloacid dehalogenase-like hydrolase... 0.04 Orthogroups_2024-Update
PSME_00034397-RA No alias (at5g02230 : 313.0) Haloacid dehalogenase-like hydrolase... 0.05 Orthogroups_2024-Update
Sopen06g032720 No alias Haloacid dehalogenase-like hydrolase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!