PSME_00004584-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004584-RA
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_05440 No alias zinc finger protein 1 0.03 Orthogroups_2024-Update
A4A49_36210 No alias zinc finger protein 5 0.04 Orthogroups_2024-Update
A4A49_57236 No alias zinc finger protein 3 0.02 Orthogroups_2024-Update
At1g24625 No alias Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266] 0.02 Orthogroups_2024-Update
At1g68360 No alias Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1] 0.03 Orthogroups_2024-Update
At2g42410 No alias zinc finger protein 11 [Source:TAIR;Acc:AT2G42410] 0.04 Orthogroups_2024-Update
At3g23130 No alias Uncharacterized protein At3g23130 (Fragment)... 0.03 Orthogroups_2024-Update
At5g01860 No alias C2H2 and C2HC zinc fingers superfamily protein... 0.04 Orthogroups_2024-Update
At5g25160 No alias ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56] 0.02 Orthogroups_2024-Update
Bradi1g58550 No alias C2H2 and C2HC zinc fingers superfamily protein 0.08 Orthogroups_2024-Update
Bradi1g76580 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Bradi2g02190 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00008.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.B02398.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.D02576.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.G02683.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Brara.K01136.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G000126 No alias zinc-finger protein 10 0.02 Orthogroups_2024-Update
GRMZM5G888196 No alias zinc-finger protein 1 0.03 Orthogroups_2024-Update
Glyma.01G036600 No alias C2H2 and C2HC zinc fingers superfamily protein 0.09 Orthogroups_2024-Update
Glyma.02G029100 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.03 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G025300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G260600 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.10G272300 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G135800 No alias telomerase activator1 0.04 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G121000 No alias telomerase activator1 0.02 Orthogroups_2024-Update
Glyma.14G110900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G212000 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
Glyma.15G004100 No alias zinc-finger protein 1 0.03 Orthogroups_2024-Update
Glyma.17G165600 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Glyma.18G186000 No alias zinc-finger protein 10 0.03 Orthogroups_2024-Update
Glyma.18G295500 No alias zinc finger protein 6 0.02 Orthogroups_2024-Update
Glyma.20G117800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G077570.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G007060.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
HORVU4Hr1G013330.1 No alias C2H2 subclass ZFP transcription factor 0.06 Orthogroups_2024-Update
HORVU5Hr1G063360.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G063390.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G066750.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G080870.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g41110 No alias ZOS3-14 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g05970 No alias ZOS5-04 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g42250 No alias ZOS12-10 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
MA_114098g0010 No alias (at1g67030 : 81.3) Encodes a zinc finger protein... 0.03 Orthogroups_2024-Update
MA_357706g0010 No alias (at2g37740 : 102.0) zinc-finger protein 10 (ZFP10);... 0.04 Orthogroups_2024-Update
MA_57501g0010 No alias (at5g25160 : 119.0) Encodes a zinc finger protein... 0.04 Orthogroups_2024-Update
Potri.002G199200 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Potri.006G063800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G089500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G059000 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G121200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G163900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G123700 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Potri.016G101400 No alias zinc-finger protein 10 0.04 Orthogroups_2024-Update
Potri.017G062500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Pp1s173_9V6 No alias zinc finger protein 0.04 Orthogroups_2024-Update
Seita.2G305800.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.2G375500.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.5G180100.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.6G104100.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.8G082400.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Seita.9G364300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G169700.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G357000.2 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G441500.2 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G037000.2 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G173300.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Solyc10g049870 No alias Zinc finger protein, putative (AHRD V3.3 *** B9SNA3_RICCO) 0.04 Orthogroups_2024-Update
Solyc10g078990 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc11g011890 No alias Zinc finger protein, putative (AHRD V3.3 *** B9T5L7_RICCO) 0.03 Orthogroups_2024-Update
Sopen01g001220 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen03g011760 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen09g024930 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!