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  5. PSME_00004600-RA

PSME_00004600-RA


Description : (at5g09220 : 342.0) member of AAAP family; amino acid permease 2 (AAP2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 4 (TAIR:AT5G63850.1); Has 2701 Blast hits to 2684 proteins in 226 species: Archae - 0; Bacteria - 6; Metazoa - 573; Fungi - 420; Plants - 1375; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (reliability: 684.0) & (original description: no original description)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004600-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_20086 No alias amino acid permease 3 0.03 Orthogroups_2024-Update
A4A49_22191 No alias putative amino acid permease 7 0.02 Orthogroups_2024-Update
Bradi1g37977 No alias amino acid permease 1 0.02 Orthogroups_2024-Update
Brara.I00596.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Brara.I01660.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
GRMZM2G110195 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
Glyma.06G090200 No alias amino acid permease 6 0.03 Orthogroups_2024-Update
HORVU4Hr1G043680.2 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
HORVU5Hr1G037660.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Potri.007G100100 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
Potri.009G133600 No alias amino acid permease 2 0.02 Orthogroups_2024-Update
Potri.011G167466 No alias amino acid permease 7 0.03 Orthogroups_2024-Update
Seita.7G282700.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Seita.7G284100.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.003G378800.1 No alias amino acid transporter *(AAP) 0.04 Orthogroups_2024-Update
Solyc04g077050 No alias Amino acid transporter (AHRD V3.3 *** P93561_SOLTU) 0.02 Orthogroups_2024-Update
Solyc07g066010 No alias Amino acid transporter, putative (AHRD V3.3 *** B9T659_RICCO) 0.02 Orthogroups_2024-Update
Sopen07g034200 No alias Transmembrane amino acid transporter protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 2 256
No external refs found!