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  5. PSME_00004642-RA

PSME_00004642-RA


Description : (original description: no original description)


Gene families : OG_42_0001384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004642-RA

Target Alias Description ECC score Gene Family Method Actions
Mp5g16560.1 No alias no description available(sp|q7m443|chit2_tulsb : 135.0) 0.02 Orthogroups_2024-Update
PSME_00004635-RA No alias (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00004638-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00007328-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00054609-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 33 197
No external refs found!