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  5. PSME_00004845-RA

PSME_00004845-RA


Description : (at2g19440 : 461.0) O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G64760.2); Has 2685 Blast hits to 2621 proteins in 154 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 44; Plants - 2618; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (p52401|e132_soltu : 198.0) Glucan endo-1,3-beta-glucosidase, basic isoform 2 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Solanum tuberosum (Potato) & (reliability: 878.0) & (original description: no original description)


Gene families : OG_42_0000342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004845-RA
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
89756 No alias O-Glycosyl hydrolases family 17 protein 0.05 Orthogroups_2024-Update
Bradi1g60410 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
GRMZM2G310739 No alias O-Glycosyl hydrolases family 17 protein 0.03 Orthogroups_2024-Update
Glyma.09G016300 No alias O-Glycosyl hydrolases family 17 protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G010040.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
PSME_00035151-RA No alias (at1g64760 : 568.0) O-Glycosyl hydrolases family 17... 0.03 Orthogroups_2024-Update
Potri.006G002100 No alias O-Glycosyl hydrolases family 17 protein 0.02 Orthogroups_2024-Update
Seita.1G092000.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.001G346200.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc12g019890 No alias Glucan endo-1,3-beta-glucosidase, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 59 379
No external refs found!