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  5. PSME_00004853-RA

PSME_00004853-RA


Description : (at5g36930 : 114.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004853-RA
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
A4A49_14783 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g63730 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Brara.B02893.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D01173.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F03618.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.I01937.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Glyma.03G048800 No alias target of AVRB operation1 0.04 Orthogroups_2024-Update
Glyma.06G259150 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.06G310000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.07G067900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.09G075500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.09G134400 No alias transmembrane receptors;ATP binding 0.04 Orthogroups_2024-Update
Glyma.10G184300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.12G132400 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.13G076200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G006400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.16G118600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.16G137600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G159100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G213800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G213900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G214100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G215100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G215300 No alias transmembrane receptors;ATP binding 0.04 Orthogroups_2024-Update
MA_10427996g0010 No alias (at5g36930 : 166.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.006G270000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G011900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.011G012000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G013401 No alias transmembrane receptors;ATP binding 0.05 Orthogroups_2024-Update
Potri.019G001600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T001700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Pp1s226_63V6 No alias tir-nbs-lrr resistance protein 0.04 Orthogroups_2024-Update
Pp1s32_318V6 No alias nls-tir-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update
Sopen05g002570 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 14 183
No external refs found!