PSME_00004959-RA

Description : (q71vm4|ima1a_orysa : 471.0) Importin alpha-1a subunit - Oryza sativa (Rice) & (at3g06720 : 451.0) Encodes importin alpha involved in nuclear import.; AT-IMP; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: cytosol, nuclear envelope, nucleolus, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 2 (TAIR:AT4G16143.2); Has 4059 Blast hits to 2974 proteins in 281 species: Archae - 4; Bacteria - 22; Metazoa - 1537; Fungi - 665; Plants - 1109; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink). & (reliability: 902.0) & (original description: no original description)

Gene families : OG_42_0000552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00004959-RA
Cluster	HCCA clusters: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
Brara.E03347.1	No alias	nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)	0.03	Orthogroups_2024-Update
PSME_00007271-RA	No alias	(at3g06720 : 573.0) Encodes importin alpha involved in...	0.01	Orthogroups_2024-Update
PSME_00017047-RA	No alias	(at3g06720 : 431.0) Encodes importin alpha involved in...	0.04	Orthogroups_2024-Update
PSME_00020343-RA	No alias	(at3g06720 : 536.0) Encodes importin alpha involved in...	0.05	Orthogroups_2024-Update
PSME_00032203-RA	No alias	(q71vm4\|ima1a_orysa : 446.0) Importin alpha-1a subunit -...	0.04	Orthogroups_2024-Update
PSME_00034110-RA	No alias	(q71vm4\|ima1a_orysa : 490.0) Importin alpha-1a subunit -...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006606	protein import into nucleus	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0017038	protein import	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	InterProScan predictions
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
CC	GO:0031262	Ndc80 complex	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO
BP	GO:0046486	glycerolipid metabolic process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	369	401
IPR000225	Armadillo	245	283
IPR000225	Armadillo	327	363
IPR000225	Armadillo	99	138
IPR002652	Importin-a_IBB	7	85
IPR032413	Arm_3	423	467

External Links

No external refs found!

PSME_00004959-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation