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  5. PSME_00004974-RA

PSME_00004974-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000435 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004974-RA
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_18487 No alias transcription factor bhlh120 0.02 Orthogroups_2024-Update
PSME_00004971-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00012481-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00019232-RA No alias (at5g51790 : 82.4) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00019999-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00027146-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00029422-RA No alias (at4g25410 : 89.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
PSME_00029446-RA No alias (at1g12540 : 86.7) basic helix-loop-helix (bHLH)... 0.04 Orthogroups_2024-Update
Seita.5G073000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 135 186
No external refs found!