PSME_00005029-RA

Description : (at2g16850 : 367.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q7xlr1|pip26_orysa : 355.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (reliability: 734.0) & (original description: no original description)

Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00005029-RA
Cluster	HCCA clusters: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07974	No alias	aquaporin pip2-4	0.02	Orthogroups_2024-Update
AC209208.3_FG002	No alias	plasma membrane intrinsic protein 1;4	0.03	Orthogroups_2024-Update
At4g00430	No alias	TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]	0.04	Orthogroups_2024-Update
Brara.J00034.1	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
GRMZM2G047368	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
GRMZM2G081192	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
GRMZM2G178693	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
Glyma.05G208941	No alias	plasma membrane intrinsic protein 1;4	0.02	Orthogroups_2024-Update
Glyma.11G228000	No alias	plasma membrane intrinsic protein 1;4	0.03	Orthogroups_2024-Update
Glyma.16G155000	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
HORVU5Hr1G084230.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
HORVU7Hr1G038940.1	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
MA_6484736g0010	No alias	(q8gri8\|pip25_orysa : 108.0) Aquaporin PIP2.5 (Plasma...	0.05	Orthogroups_2024-Update
MA_9821440g0010	No alias	(at2g16850 : 373.0) plasma membrane intrinsic protein...	0.04	Orthogroups_2024-Update
Mp1g29040.1	No alias	plasma membrane intrinsic protein (PIP)	0.02	Orthogroups_2024-Update
Mp4g04440.1	No alias	plasma membrane intrinsic protein (PIP)	0.03	Orthogroups_2024-Update
PSME_00001153-RA	No alias	(at3g53420 : 222.0) a member of the plasma membrane...	0.03	Orthogroups_2024-Update
PSME_00005912-RA	No alias	(at2g16850 : 374.0) plasma membrane intrinsic protein...	0.05	Orthogroups_2024-Update
Potri.005G109300	No alias	plasma membrane intrinsic protein 2;8	0.04	Orthogroups_2024-Update
Seita.1G264900.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Seita.2G123300.1	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
Seita.2G291500.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Solyc06g011350	No alias	plasma membrane intrinsic protein 2.4	0.02	Orthogroups_2024-Update
Solyc11g069430	No alias	plasma membrane intrinsic protein 2.6	0.02	Orthogroups_2024-Update
Sopen01g038500	No alias	Major intrinsic protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	InterProScan predictions
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006281	DNA repair	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
BP	GO:0033554	cellular response to stress	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
BP	GO:0051716	cellular response to stimulus	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000425	MIP	29	254

External Links

No external refs found!

PSME_00005029-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation