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  5. PSME_00005180-RA

PSME_00005180-RA


Description : (at3g51430 : 238.0) Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.; YELLOW-LEAF-SPECIFIC GENE 2 (YLS2); CONTAINS InterPro DOMAIN/s: Strictosidine synthase (InterPro:IPR004141), Strictosidine synthase, conserved region (InterPro:IPR018119), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51440.1). & (p18417|stsy_catro : 80.9) Strictosidine synthase precursor (EC 4.3.3.2) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 476.0) & (original description: no original description)


Gene families : OG_42_0001124 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001124_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005180-RA

Target Alias Description ECC score Gene Family Method Actions
At3g51440 No alias Protein STRICTOSIDINE SYNTHASE-LIKE 6... 0.02 Orthogroups_2024-Update
Bradi3g32350 No alias strictosidine synthase-like 4 0.03 Orthogroups_2024-Update
Glyma.09G070500 No alias strictosidine synthase-like 4 0.02 Orthogroups_2024-Update
MA_131585g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00042381-RA No alias (at3g51430 : 189.0) Although this enzyme is predicted to... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA InterProScan predictions
MF GO:0016844 strictosidine synthase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 154 241
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