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  5. PSME_00005217-RA

PSME_00005217-RA


Description : (at2g02710 : 315.0) Encodes a putative blue light receptor protein.; PAS/LOV PROTEIN C (PLPC); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 630.0) & (original description: no original description)


Gene families : OG_42_0004388 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004388_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005217-RA
Cluster HCCA clusters: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Potri.010G053500 No alias PAS/LOV protein B 0.03 Orthogroups_2024-Update
Pp1s199_143V6 No alias blue light receptor 0.02 Orthogroups_2024-Update
Sopen01g006090 No alias PAS domain 0.03 Orthogroups_2024-Update
Sopen05g002980 No alias PAS domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR000014 PAS 54 148
IPR000014 PAS 293 387
No external refs found!