Description : (at5g16780 : 312.0) Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes.; DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: in 9 processes; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 31 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SART-1 protein (InterPro:IPR005011); BEST Arabidopsis thaliana protein match is: SART-1 family (TAIR:AT3G14700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 624.0) & (original description: no original description)
Gene families : OG_42_0002097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00005254-RA | |
Cluster | HCCA clusters: Cluster_49 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc11g008470 | No alias | U4/U6.U5 tri-snRNP-associated protein 1 (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000776 | kinetochore | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
CC | GO:0031262 | Ndc80 complex | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
MF | GO:0051920 | peroxiredoxin activity | IEP | Predicted GO |
MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
No external refs found! |