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  5. PSME_00005303-RA

PSME_00005303-RA


Description : (at2g04030 : 1018.0) Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.; CR88; FUNCTIONS IN: ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, chloroplast stroma, plasma membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 89.1 (TAIR:AT3G07770.1); Has 8908 Blast hits to 8859 proteins in 2447 species: Archae - 4; Bacteria - 3393; Metazoa - 2086; Fungi - 314; Plants - 461; Viruses - 0; Other Eukaryotes - 2650 (source: NCBI BLink). & (p51819|hsp83_iponi : 604.0) Heat shock protein 83 - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2036.0) & (original description: no original description)


Gene families : OG_42_0000360 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005303-RA
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
267300 No alias HEAT SHOCK PROTEIN 81.4 0.02 Orthogroups_2024-Update
440901 No alias Chaperone protein htpG family protein 0.02 Orthogroups_2024-Update
88538 No alias Chaperone protein htpG family protein 0.03 Orthogroups_2024-Update
At3g07770 No alias Heat shock protein 90-6, mitochondrial... 0.03 Orthogroups_2024-Update
At4g24190 No alias Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5] 0.02 Orthogroups_2024-Update
At5g56000 No alias Hsp81.4 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ52] 0.05 Orthogroups_2024-Update
At5g56030 No alias Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6] 0.03 Orthogroups_2024-Update
Bradi1g30130 No alias Chaperone protein htpG family protein 0.04 Orthogroups_2024-Update
Bradi3g39620 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Bradi3g39630 No alias HEAT SHOCK PROTEIN 81.4 0.04 Orthogroups_2024-Update
Brara.A01424.1 No alias chaperone *(Hsp90) 0.06 Orthogroups_2024-Update
Brara.F03346.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Cre02.g080650 No alias Chaperone protein htpG family protein 0.01 Orthogroups_2024-Update
Cre09.g386750 No alias HEAT SHOCK PROTEIN 81.4 0.02 Orthogroups_2024-Update
Cre12.g514850 No alias Chaperone protein htpG family protein 0.01 Orthogroups_2024-Update
GRMZM2G012631 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
GRMZM2G024668 No alias heat shock protein 81-2 0.03 Orthogroups_2024-Update
GRMZM2G069651 No alias HEAT SHOCK PROTEIN 81.4 0.04 Orthogroups_2024-Update
Glyma.02G302500 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Glyma.08G332900 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Glyma.14G007700 No alias HEAT SHOCK PROTEIN 89.1 0.03 Orthogroups_2024-Update
Glyma.14G011600 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
Glyma.14G219700 No alias Chaperone protein htpG family protein 0.03 Orthogroups_2024-Update
Glyma.17G258700 No alias Chaperone protein htpG family protein 0.04 Orthogroups_2024-Update
Glyma.18G074100 No alias HEAT SHOCK PROTEIN 81.4 0.03 Orthogroups_2024-Update
HORVU5Hr1G027910.15 No alias chaperone *(Hsp90) 0.05 Orthogroups_2024-Update
HORVU5Hr1G072420.2 No alias chaperone *(Hsp90) 0.04 Orthogroups_2024-Update
Mp1g26610.1 No alias chaperone (Hsp90) 0.02 Orthogroups_2024-Update
Mp2g04900.1 No alias chaperone (Hsp90) 0.02 Orthogroups_2024-Update
PSME_00002559-RA No alias (at2g04030 : 1108.0) Encodes a chloroplast-targeted... 0.03 Orthogroups_2024-Update
Potri.001G466000 No alias HEAT SHOCK PROTEIN 81.4 0.05 Orthogroups_2024-Update
Potri.006G002800 No alias HEAT SHOCK PROTEIN 81.4 0.04 Orthogroups_2024-Update
Potri.010G136800 No alias Chaperone protein htpG family protein 0.03 Orthogroups_2024-Update
Pp1s118_219V6 No alias heat shock protein 0.02 Orthogroups_2024-Update
Pp1s126_38V6 No alias heat shock protein endoplasmic reticulum 0.02 Orthogroups_2024-Update
Pp1s220_79V6 No alias heat shock protein 90 0.02 Orthogroups_2024-Update
Seita.3G351500.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Seita.4G281500.1 No alias chaperone *(Hsp90) 0.02 Orthogroups_2024-Update
Seita.6G191100.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Seita.6G200000.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Sobic.010G267400.1 No alias chaperone *(Hsp90) 0.03 Orthogroups_2024-Update
Solyc04g081570 No alias Heat shock protein 90 (AHRD V3.3 *** G9MD87_TOBAC) 0.02 Orthogroups_2024-Update
Solyc07g047790 No alias Heat shock protein, putative (AHRD V3.3 *** B9T0C8_RICCO) 0.03 Orthogroups_2024-Update
Sopen04g035180 No alias Hsp90 protein 0.03 Orthogroups_2024-Update
Sopen12g007780 No alias Hsp90 protein 0.04 Orthogroups_2024-Update
evm.model.contig_3454.1 No alias (at2g04030 : 568.0) Encodes a chloroplast-targeted... 0.02 Orthogroups_2024-Update
evm.model.contig_601.1 No alias (at5g56030 : 902.0) A member of heat shock protein 90... 0.03 Orthogroups_2024-Update
evm.model.tig00021126.11 No alias (p35016|enpl_catro : 328.0) Endoplasmin homolog... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR003594 HATPase_C 129 289
IPR001404 Hsp90_fam 293 773
No external refs found!