Description : (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor (OsEXPB11) (Beta-expansin-11) (OsaEXPb1.20) - Oryza sativa (Rice) & (at2g20750 : 184.0) member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio); expansin B1 (EXPB1); INVOLVED IN: plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B3 (TAIR:AT4G28250.1); Has 2076 Blast hits to 2069 proteins in 143 species: Archae - 0; Bacteria - 15; Metazoa - 0; Fungi - 9; Plants - 2024; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). & (reliability: 368.0) & (original description: no original description)
Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00005304-RA | |
Cluster | HCCA clusters: Cluster_275 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_20975 | No alias | putative expansin-b2 | 0.02 | Orthogroups_2024-Update | |
At2g20750 | No alias | Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2] | 0.04 | Orthogroups_2024-Update | |
At4g28250 | No alias | EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] | 0.02 | Orthogroups_2024-Update | |
Bradi3g50740 | No alias | expansin B2 | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G088080.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G060410.2 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
LOC_Os02g44108 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g01270 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os04g46650 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10427897g0010 | No alias | (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... | 0.04 | Orthogroups_2024-Update | |
PSME_00014538-RA | No alias | (q6h676|exb11_orysa : 160.0) Expansin-B11 precursor... | 0.04 | Orthogroups_2024-Update | |
PSME_00024925-RA | No alias | (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... | 0.04 | Orthogroups_2024-Update | |
PSME_00035481-RA | No alias | (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... | 0.03 | Orthogroups_2024-Update | |
PSME_00039911-RA | No alias | (at2g20750 : 117.0) member of BETA-EXPANSINS. Naming... | 0.04 | Orthogroups_2024-Update | |
PSME_00042515-RA | No alias | (at1g65680 : 150.0) member of BETA-EXPANSINS. Naming... | 0.04 | Orthogroups_2024-Update | |
PSME_00048195-RA | No alias | (q7xt40|exb15_orysa : 117.0) Expansin-B15 precursor... | 0.04 | Orthogroups_2024-Update | |
Pp1s251_59V6 | No alias | beta-expansin 3 | 0.02 | Orthogroups_2024-Update | |
Seita.9G326900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.9G327100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.001G300400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.001G301000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Predicted GO |
CC | GO:0005618 | cell wall | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
MF | GO:0008198 | ferrous iron binding | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Predicted GO |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0019107 | myristoyltransferase activity | IEP | Predicted GO |
CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
CC | GO:0048046 | apoplast | IEP | Predicted GO |
MF | GO:0051743 | red chlorophyll catabolite reductase activity | IEP | Predicted GO |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009009 | RlpA-like_DPBB | 77 | 117 |
No external refs found! |