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- Sequence
- PSME_00005354-RA
PSME_00005354-RA
Description : (q43767|nlt41_horvu : 97.4) Nonspecific lipid-transfer protein 4.1 precursor (LTP 4.1) (CW21) (CW-21) - Hordeum vulgare (Barley) & (at3g08770 : 83.2) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.; lipid transfer protein 6 (LTP6); FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G01870.1). & (reliability: 166.4) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00005354-RA | |
| Cluster | HCCA clusters: Cluster_43 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| At2g38540 | No alias | Non-specific lipid-transfer protein... | 0.02 | Orthogroups_2024-Update | |
| Brara.A02079.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.E00678.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g02300 | No alias | LTPL26 - Protease inhibitor/seed storage/LTP family... | 0.02 | Orthogroups_2024-Update | |
| Seita.8G013500.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.008G030900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Solyc02g087910 | No alias | Non-specific lipid-transfer protein (AHRD V3.3 *** K4BBU7_SOLLC) | 0.02 | Orthogroups_2024-Update | |
| Solyc06g005770 | No alias | Non-specific lipid-transfer protein (AHRD V3.3 *** K4C359_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc06g005780 | No alias | Non-specific lipid-transfer protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g075090 | No alias | Non-specific lipid-transfer protein (AHRD V3.3 *** Q4A1N0_SOLLC) | 0.03 | Orthogroups_2024-Update | |
| Solyc10g075110 | No alias | Non-specific lipid-transfer protein (AHRD V3.3 *** M1AVB9_SOLTU) | 0.03 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0009415 | response to water | IEP | Predicted GO |
| MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016714 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predicted GO |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
| MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR016140 | Bifunc_inhib/LTP/seed_store | 30 | 106 |
