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  5. PSME_00005409-RA

PSME_00005409-RA


Description : (at3g63000 : 540.0) NPL4-like protein 1 (NPL41); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NPL4 (InterPro:IPR007717); BEST Arabidopsis thaliana protein match is: Nuclear pore localisation protein NPL4 (TAIR:AT2G47970.1); Has 398 Blast hits to 398 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 123; Plants - 67; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). & (q9as33|npl4_orysa : 433.0) NPL4-like protein - Oryza sativa (Rice) & (reliability: 1080.0) & (original description: no original description)


Gene families : OG_42_0003550 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005409-RA

Target Alias Description ECC score Gene Family Method Actions
PSME_00005408-RA No alias (at3g63000 : 541.0) NPL4-like protein 1 (NPL41);... 0.12 Orthogroups_2024-Update
Seita.5G174200.1 No alias component *(NPL4) of NPL4-UFD1 heterodimer 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007717 NPL4_C 157 300
IPR024682 Npl4_Ub-like_dom 1 83
No external refs found!