1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00005423-RA

PSME_00005423-RA


Description : (at1g53680 : 150.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 28 (GSTU28); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to cadmium ion, toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 6308 Blast hits to 6256 proteins in 1129 species: Archae - 0; Bacteria - 2948; Metazoa - 456; Fungi - 175; Plants - 1987; Viruses - 0; Other Eukaryotes - 742 (source: NCBI BLink). & (p46417|lgul_soybn : 149.0) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase) (Aldoketomutase) (Glyoxalase I) - Glycine max (Soybean) & (reliability: 300.0) & (original description: no original description)


Gene families : OG_42_0000012 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005423-RA
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
165383 No alias glutathione S-transferase TAU 19 0.05 Orthogroups_2024-Update
404313 No alias glutathione S-transferase TAU 20 0.04 Orthogroups_2024-Update
78408 No alias glutathione S-transferase tau 7 0.03 Orthogroups_2024-Update
78973 No alias glutathione S-transferase TAU 19 0.04 Orthogroups_2024-Update
A4A49_02073 No alias putative glutathione s-transferase 0.02 Orthogroups_2024-Update
A4A49_05978 No alias putative glutathione s-transferase 0.04 Orthogroups_2024-Update
A4A49_36119 No alias glutathione transferase gst 23 0.02 Orthogroups_2024-Update
At1g69930 No alias Glutathione S-transferase U11... 0.03 Orthogroups_2024-Update
At2g29460 No alias Glutathione S-transferase U4... 0.04 Orthogroups_2024-Update
Bradi1g34727 No alias glutathione S-transferase TAU 18 0.03 Orthogroups_2024-Update
Bradi3g31750 No alias Glutathione S-transferase family protein 0.04 Orthogroups_2024-Update
Bradi3g31820 No alias glutathione S-transferase TAU 18 0.03 Orthogroups_2024-Update
Brara.A03577.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Brara.G03579.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G044383 No alias Glutathione S-transferase family protein 0.02 Orthogroups_2024-Update
Glyma.01G106000 No alias glutathione S-transferase TAU 8 0.02 Orthogroups_2024-Update
Glyma.03G073702 No alias glutathione S-transferase TAU 8 0.03 Orthogroups_2024-Update
Glyma.07G140200 No alias glutathione S-transferase tau 7 0.03 Orthogroups_2024-Update
Glyma.07G140700 No alias glutathione S-transferase TAU 8 0.03 Orthogroups_2024-Update
Glyma.18G190300 No alias glutathione S-transferase tau 7 0.04 Orthogroups_2024-Update
HORVU3Hr1G106450.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
HORVU5Hr1G045850.3 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
HORVU6Hr1G026810.3 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
LOC_Os09g29200 No alias glutathione S-transferase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g38740 No alias glutathione S-transferase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434037g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_17478g0010 No alias (q06398|gstu6_orysa : 204.0) Probable glutathione... 0.03 Orthogroups_2024-Update
MA_188810g0010 No alias (at1g59700 : 186.0) Encodes glutathione transferase... 0.03 Orthogroups_2024-Update
MA_402874g0010 No alias (at1g10360 : 117.0) Encodes glutathione transferase... 0.03 Orthogroups_2024-Update
MA_8315329g0010 No alias (at1g10370 : 154.0) EARLY-RESPONSIVE TO DEHYDRATION 9... 0.06 Orthogroups_2024-Update
MA_87785g0010 No alias (at1g78380 : 249.0) Encodes a glutathione transferase... 0.03 Orthogroups_2024-Update
PSME_00017932-RA No alias (at1g59700 : 193.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00017935-RA No alias (at1g59700 : 195.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00019978-RA No alias (at1g10370 : 195.0) EARLY-RESPONSIVE TO DEHYDRATION 9... 0.05 Orthogroups_2024-Update
PSME_00035284-RA No alias (at1g59700 : 198.0) Encodes glutathione transferase... 0.03 Orthogroups_2024-Update
PSME_00037674-RA No alias (at1g59700 : 212.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00040071-RA No alias (at1g59700 : 214.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00054127-RA No alias (at1g59700 : 199.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00054486-RA No alias (at1g59700 : 190.0) Encodes glutathione transferase... 0.03 Orthogroups_2024-Update
PSME_00054683-RA No alias (at1g78320 : 223.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00055383-RA No alias (at1g17180 : 238.0) Encodes glutathione transferase... 0.03 Orthogroups_2024-Update
Potri.001G431600 No alias glutathione S-transferase TAU 25 0.03 Orthogroups_2024-Update
Potri.001G437200 No alias glutathione S-transferase TAU 19 0.03 Orthogroups_2024-Update
Seita.8G008300.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Seita.9G346800.1 No alias class tau glutathione S-transferase 0.05 Orthogroups_2024-Update
Seita.9G347400.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Sobic.001G319100.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Sobic.001G319500.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Sobic.002G035700.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Sobic.003G187000.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Solyc01g081270 No alias Glutathione s-transferase, putative (AHRD V3.3 *** B9SPC9_RICCO) 0.04 Orthogroups_2024-Update
Solyc09g011510 No alias Glutathione S-transferase-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g084960 No alias Glutathione S-transferase-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen07g029790 No alias Glutathione S-transferase, C-terminal domain 0.02 Orthogroups_2024-Update
Sopen07g029830 No alias Glutathione S-transferase, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen09g006440 No alias Glutathione S-transferase, C-terminal domain 0.04 Orthogroups_2024-Update
Sopen09g034120 No alias hypothetical protein 0.02 Orthogroups_2024-Update
evm.model.tig00020693.10 No alias (q03662|gstx1_tobac : 85.1) Probable glutathione... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 12 81
No external refs found!