Description : (at2g03880 : 518.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G24000.1); Has 41924 Blast hits to 14587 proteins in 276 species: Archae - 3; Bacteria - 26; Metazoa - 84; Fungi - 128; Plants - 40967; Viruses - 0; Other Eukaryotes - 716 (source: NCBI BLink). & (q76c99|rf1_orysa : 96.7) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1030.0) & (original description: no original description)
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00005439-RA | |
Cluster | HCCA clusters: Cluster_461 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
89230 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
96927 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
At3g29230 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G099875 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G177715 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G159200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G173900 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.08G086500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.12G239300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G092840.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
PSME_00037497-RA | No alias | (at4g13650 : 692.0) Pentatricopeptide repeat (PPR)... | 0.06 | Orthogroups_2024-Update | |
Seita.8G075300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.04 | Orthogroups_2024-Update | |
Sopen02g019790 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen03g011150 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen04g008620 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen07g017190 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen09g027460 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
BP | GO:0006855 | drug transmembrane transport | IEP | Predicted GO |
MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015893 | drug transport | IEP | Predicted GO |
No external refs found! |