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  5. PSME_00005454-RA

PSME_00005454-RA


Description : (at3g51680 : 354.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 313.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 708.0) & (original description: no original description)


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005454-RA
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
139060 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
229892 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
415138 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
A4A49_00051 No alias zerumbone synthase 0.04 Orthogroups_2024-Update
A4A49_10897 No alias xanthoxin dehydrogenase 0.04 Orthogroups_2024-Update
A4A49_26916 No alias short-chain dehydrogenase reductase 3b 0.03 Orthogroups_2024-Update
A4A49_28903 No alias short-chain dehydrogenase reductase 2a 0.03 Orthogroups_2024-Update
A4A49_61240 No alias momilactone a synthase 0.05 Orthogroups_2024-Update
At2g47150 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.02 Orthogroups_2024-Update
At3g26770 No alias Alcohol dehydrogenase-like protein... 0.03 Orthogroups_2024-Update
At3g51680 No alias Short-chain dehydrogenase reductase 2a... 0.03 Orthogroups_2024-Update
Bradi1g04320 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g10757 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Brara.C02351.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00208.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.03G041500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G113200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G222600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G190100 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G279800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G197100 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G197200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G015140.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G021540.3 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os03g61740 No alias sex determination protein tasselseed-2, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os07g46830 No alias sex determination protein tasselseed-2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g46920 No alias sex determination protein tasselseed-2, putative, expressed 0.03 Orthogroups_2024-Update
MA_112182g0010 No alias (at3g51680 : 203.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_289156g0010 No alias (at3g51680 : 225.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_57399g0020 No alias (p50160|ts2_maize : 205.0) Sex determination protein... 0.02 Orthogroups_2024-Update
MA_7515994g0010 No alias (at3g51680 : 189.0) NAD(P)-binding Rossmann-fold... 0.06 Orthogroups_2024-Update
MA_92200g0020 No alias (at3g51680 : 242.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
Mp1g06800.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Orthogroups_2024-Update
PSME_00006761-RA No alias (at3g51680 : 249.0) NAD(P)-binding Rossmann-fold... 0.01 Orthogroups_2024-Update
PSME_00047761-RA No alias (at3g51680 : 270.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00054773-RA No alias (at3g51680 : 212.0) NAD(P)-binding Rossmann-fold... 0.06 Orthogroups_2024-Update
Potri.006G206800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G115300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G074000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Pp1s8_240V6 No alias short chain alcohol 0.02 Orthogroups_2024-Update
Seita.4G117600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G139100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G139300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G086700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G436000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G042000.1 No alias xanthoxin oxidase *(ABA2) 0.03 Orthogroups_2024-Update
Sobic.005G129700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G123000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g091660 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g085380 No alias Short-chain dehydrogenase/reductase family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g056610 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Solyc12g056710 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen10g032650 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update
Sopen12g029250 No alias Enoyl-(Acyl carrier protein) reductase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!