PSME_00005499-RA

Description : (at1g76680 : 507.0) Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 1 (OPR1); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, developing seed stage; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1014.0) & (original description: no original description)

Gene families : OG_42_0000346 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)

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Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00005499-RA
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
111662	No alias	oxophytodienoate-reductase 3	0.02	Orthogroups_2024-Update
173572	No alias	12-oxophytodienoate reductase 2	0.03	Orthogroups_2024-Update
At1g17990	No alias	Putative 12-oxophytodienoate reductase-like protein 2B...	0.03	Orthogroups_2024-Update
LOC_Os06g11210	No alias	12-oxophytodienoate reductase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g35740	No alias	12-oxophytodienoate reductase, putative, expressed	0.03	Orthogroups_2024-Update
MA_10435051g0010	No alias	(at1g76690 : 484.0) Encodes one of the closely related...	0.03	Orthogroups_2024-Update
MA_46456g0010	No alias	(at1g76690 : 525.0) Encodes one of the closely related...	0.04	Orthogroups_2024-Update
PSME_00005503-RA	No alias	(at1g76690 : 528.0) Encodes one of the closely related...	0.04	Orthogroups_2024-Update
Potri.006G142800	No alias	oxophytodienoate-reductase 3	0.03	Orthogroups_2024-Update
Potri.018G065600	No alias	oxophytodienoate-reductase 3	0.03	Orthogroups_2024-Update
Pp1s62_139V6	No alias	12-oxophytodienoate reductase	0.02	Orthogroups_2024-Update
Pp1s9_107V6	No alias	12-oxophytodienoic acid -reductase	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0010181	FMN binding	IEA	InterProScan predictions
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001155	OxRdtase_FMN_N	60	395

External Links

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PSME_00005499-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation