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  5. PSME_00005654-RA

PSME_00005654-RA


Description : (at5g13000 : 483.0) encodes a gene similar to callose synthase; glucan synthase-like 12 (GSL12); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: callose synthase 1 (TAIR:AT1G05570.1); Has 1373 Blast hits to 1031 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 677; Plants - 549; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 966.0) & (original description: no original description)


Gene families : OG_42_0000121 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005654-RA
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
At5g36870 No alias Callose synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTG5] 0.03 Orthogroups_2024-Update
Bradi3g60790 No alias glucan synthase-like 12 0.03 Orthogroups_2024-Update
Cre03.g185350 No alias callose synthase 5 0.01 Orthogroups_2024-Update
GRMZM2G326643 No alias glucan synthase-like 8 0.02 Orthogroups_2024-Update
Glyma.12G113302 No alias glucan synthase-like 5 0.03 Orthogroups_2024-Update
HORVU4Hr1G085510.27 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00012217-RA No alias (at2g13680 : 323.0) Responsible for the synthesis of... 0.02 Orthogroups_2024-Update
Potri.001G230000 No alias callose synthase 1 0.02 Orthogroups_2024-Update
Pp1s67_70V6 No alias transferring glycosyl 0.03 Orthogroups_2024-Update
Pp1s88_137V6 No alias T1B9.18; glycosyl transferase family 48 protein... 0.04 Orthogroups_2024-Update
Sopen03g030690 No alias 1,3-beta-glucan synthase component 0.03 Orthogroups_2024-Update
evm.model.tig00001041.32 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.tig00020944.35 No alias (at4g03550 : 160.0) Encodes a callose synthase that is... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 228 339
No external refs found!