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  5. PSME_00005793-RA

PSME_00005793-RA


Description : (original description: no original description)


Gene families : OG_42_0001384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005793-RA
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Bradi3g26850 No alias Function unknown 0.05 Orthogroups_2024-Update
LOC_Os10g28120 No alias glycosyl hydrolase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00004638-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
Seita.8G077000.1 No alias 2S globulin seed storage protein 0.03 Orthogroups_2024-Update
Sobic.001G247900.1 No alias 2S globulin seed storage protein 0.04 Orthogroups_2024-Update
Sopen11g030420 No alias Glycosyl hydrolases family 18 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 142 306
No external refs found!