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  5. PSME_00005810-RA

PSME_00005810-RA


Description : (q40680|ef1d1_orysa : 255.0) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation factor 1B-beta 1) (eEF-1B beta 1) - Oryza sativa (Rice) & (at1g30230 : 243.0) Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: plasma membrane, eukaryotic translation elongation factor 1 complex; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Translation elongation factor EF1B/ribosomal protein S6 (InterPro:IPR014717), Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange (InterPro:IPR014038), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Translation elongation factor EF1B, beta/delta chains, conserved site (InterPro:IPR001326); BEST Arabidopsis thaliana protein match is: Translation elongation factor EF1B/ribosomal protein S6 family protein (TAIR:AT2G18110.1); Has 1008 Blast hits to 1006 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 526; Fungi - 158; Plants - 163; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink). & (reliability: 486.0) & (original description: no original description)


Gene families : OG_42_0001570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005810-RA
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
94371 No alias Glutathione S-transferase, C-terminal-like;Translation... 0.04 Orthogroups_2024-Update
Bradi1g18710 No alias Glutathione S-transferase, C-terminal-like;Translation... 0.07 Orthogroups_2024-Update
Bradi1g21550 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 Orthogroups_2024-Update
Brara.H01903.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 Orthogroups_2024-Update
Brara.J01635.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 Orthogroups_2024-Update
Glyma.06G170900 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.04 Orthogroups_2024-Update
Glyma.13G073200 No alias Glutathione S-transferase, C-terminal-like;Translation... 0.04 Orthogroups_2024-Update
HORVU2Hr1G022090.4 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 Orthogroups_2024-Update
HORVU2Hr1G031450.6 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.03 Orthogroups_2024-Update
MA_102713g0020 No alias (q40680|ef1d1_orysa : 235.0) Elongation factor 1-delta 1... 0.06 Orthogroups_2024-Update
Mp8g01660.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 Orthogroups_2024-Update
Potri.012G096400 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.02 Orthogroups_2024-Update
Potri.015G094200 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 Orthogroups_2024-Update
Seita.2G386600.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.05 Orthogroups_2024-Update
Seita.2G421400.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.11 Orthogroups_2024-Update
Sobic.002G373800.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.04 Orthogroups_2024-Update
Sobic.002G406500.1 No alias component *(eEF1B-beta/-delta) of eEF1B... 0.09 Orthogroups_2024-Update
Solyc01g098000 No alias Elongation factor 1-beta (AHRD V3.3 *** D7KES3_ARALL) 0.05 Orthogroups_2024-Update
Solyc07g016150 No alias Elongation factor 1-beta (AHRD V3.3 *** A0A072UHR3_MEDTR) 0.06 Orthogroups_2024-Update
Solyc11g072190 No alias Elongation factor 1-beta', putative (AHRD V3.3 *** Q6L4C2_SOLDE) 0.07 Orthogroups_2024-Update
Sopen11g029840 No alias EF-1 guanine nucleotide exchange domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA InterProScan predictions
BP GO:0006414 translational elongation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 137 224
No external refs found!