PSME_00005912-RA

Description : (at2g16850 : 374.0) plasma membrane intrinsic protein 2;8 (PIP2;8); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 3 (TAIR:AT4G35100.2); Has 11009 Blast hits to 10999 proteins in 2241 species: Archae - 81; Bacteria - 5232; Metazoa - 1475; Fungi - 457; Plants - 2523; Viruses - 2; Other Eukaryotes - 1239 (source: NCBI BLink). & (q7xlr1|pip26_orysa : 355.0) Probable aquaporin PIP2.6 (Plasma membrane intrinsic protein 2.6) (OsPIP2.6) - Oryza sativa (Rice) & (gnl|cdd|38754 : 85.2) no description available & (reliability: 748.0) & (original description: no original description)

Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00005912-RA
Cluster	HCCA clusters: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
271415	No alias	plasma membrane intrinsic protein 1B	0.03	Orthogroups_2024-Update
At2g45960	No alias	Plasma membrane intrinsic protein 1B...	0.02	Orthogroups_2024-Update
At3g54820	No alias	Probable aquaporin PIP2-5...	0.04	Orthogroups_2024-Update
At4g00430	No alias	TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]	0.03	Orthogroups_2024-Update
At4g23400	No alias	PIP1D [Source:UniProtKB/TrEMBL;Acc:A0A178V129]	0.03	Orthogroups_2024-Update
Bradi3g56020	No alias	plasma membrane intrinsic protein 1;4	0.03	Orthogroups_2024-Update
Brara.C02314.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Brara.E00787.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Brara.I03632.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Brara.I03737.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Brara.I05637.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Brara.J00034.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
GRMZM2G136032	No alias	plasma membrane intrinsic protein 1;4	0.03	Orthogroups_2024-Update
Glyma.12G075400	No alias	plasma membrane intrinsic protein 2;4	0.02	Orthogroups_2024-Update
Glyma.16G155000	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
Glyma.18G198300	No alias	plasma membrane intrinsic protein 1;4	0.03	Orthogroups_2024-Update
Glyma.20G179700	No alias	plasma membrane intrinsic protein 2;5	0.03	Orthogroups_2024-Update
HORVU6Hr1G058930.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
HORVU7Hr1G038940.1	No alias	plasma membrane intrinsic protein *(PIP)	0.04	Orthogroups_2024-Update
LOC_Os04g16450	No alias	aquaporin protein, putative, expressed	0.05	Orthogroups_2024-Update
LOC_Os10g34000	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_6484736g0010	No alias	(q8gri8\|pip25_orysa : 108.0) Aquaporin PIP2.5 (Plasma...	0.05	Orthogroups_2024-Update
MA_72253g0010	No alias	(at2g16850 : 454.0) plasma membrane intrinsic protein...	0.03	Orthogroups_2024-Update
MA_72395g0010	No alias	(at2g16850 : 441.0) plasma membrane intrinsic protein...	0.03	Orthogroups_2024-Update
MA_93945g0010	No alias	(q6k215\|pip22_orysa : 293.0) Probable aquaporin PIP2.2...	0.06	Orthogroups_2024-Update
MA_9821440g0010	No alias	(at2g16850 : 373.0) plasma membrane intrinsic protein...	0.03	Orthogroups_2024-Update
PSME_00005029-RA	No alias	(at2g16850 : 367.0) plasma membrane intrinsic protein...	0.05	Orthogroups_2024-Update
Potri.005G109300	No alias	plasma membrane intrinsic protein 2;8	0.03	Orthogroups_2024-Update
Potri.016G113300	No alias	plasma membrane intrinsic protein 1;4	0.04	Orthogroups_2024-Update
Pp1s1_535V6	No alias	plasma membrane aquaporin	0.03	Orthogroups_2024-Update
Seita.1G264900.1	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
Seita.2G123300.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Seita.2G291500.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Seita.7G170200.1	No alias	plasma membrane intrinsic protein *(PIP)	0.06	Orthogroups_2024-Update
Sobic.002G125200.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Sobic.002G125700.2	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
Solyc10g084120	No alias	plasma membrane intrinsic protein 2.5	0.02	Orthogroups_2024-Update
Sopen01g038500	No alias	Major intrinsic protein	0.04	Orthogroups_2024-Update
Sopen10g025420	No alias	Major intrinsic protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	InterProScan predictions
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0005507	copper ion binding	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000425	MIP	898	1126

External Links

No external refs found!

PSME_00005912-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation