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PSME_00005939-RA


Description : (q39817|calx_soybn : 703.0) Calnexin homolog precursor - Glycine max (Soybean) & (at5g61790 : 685.0) calnexin 1 (CNX1); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: protein folding; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); BEST Arabidopsis thaliana protein match is: Calreticulin family protein (TAIR:AT5G07340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1370.0) & (original description: no original description)


Gene families : OG_42_0002915 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005939-RA
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Bradi2g01430 No alias calnexin 1 0.09 Orthogroups_2024-Update
Bradi2g01440 No alias calnexin 1 0.05 Orthogroups_2024-Update
Brara.B03773.1 No alias membrane-anchored lectin chaperone *(CNX) 0.04 Orthogroups_2024-Update
GRMZM2G134668 No alias calnexin 1 0.05 Orthogroups_2024-Update
Glyma.04G202900 No alias calnexin 1 0.07 Orthogroups_2024-Update
Glyma.05G199200 No alias calnexin 1 0.04 Orthogroups_2024-Update
Glyma.06G162600 No alias calnexin 1 0.07 Orthogroups_2024-Update
Glyma.08G006500 No alias calnexin 1 0.06 Orthogroups_2024-Update
HORVU6Hr1G018420.3 No alias membrane-anchored lectin chaperone *(CNX) 0.03 Orthogroups_2024-Update
Kfl00062_0150 kfl00062_0150_v1.1 (q39817|calx_soybn : 515.0) Calnexin homolog precursor -... 0.03 Orthogroups_2024-Update
Mp4g06370.1 No alias lectin chaperone (CNX) 0.02 Orthogroups_2024-Update
Potri.015G109200 No alias calnexin 1 0.05 Orthogroups_2024-Update
Pp1s25_261V6 No alias papillar cell-specific calnexin 0.02 Orthogroups_2024-Update
Seita.7G083500.1 No alias membrane-anchored lectin chaperone *(CNX) 0.07 Orthogroups_2024-Update
Sobic.006G062500.1 No alias membrane-anchored lectin chaperone *(CNX) 0.04 Orthogroups_2024-Update
Solyc03g118040 No alias calnexin 0.06 Orthogroups_2024-Update
Sopen03g036940 No alias Calreticulin family 0.04 Orthogroups_2024-Update
evm.model.tig00001527.11 No alias (q39817|calx_soybn : 245.0) Calnexin homolog precursor -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0005783 endoplasmic reticulum IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR001580 Calret/calnex 38 393
No external refs found!