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  5. PSME_00006009-RA

PSME_00006009-RA


Description : (at3g17630 : 266.0) member of Putative Na+/H+ antiporter family; cation/H+ exchanger 19 (CHX19); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 18 (TAIR:AT5G41610.1); Has 10353 Blast hits to 10313 proteins in 2156 species: Archae - 388; Bacteria - 8084; Metazoa - 59; Fungi - 214; Plants - 674; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). & (reliability: 532.0) & (original description: no original description)


Gene families : OG_42_0000316 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000316_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006009-RA
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G192400 No alias cation/hydrogen exchanger 15 0.03 Orthogroups_2024-Update
Glyma.13G131200 No alias cation/H+ exchanger 20 0.03 Orthogroups_2024-Update
LOC_Os05g40650 No alias ATCHX, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g10490.1 No alias proton:monovalent cation antiporter (CHX) 0.02 Orthogroups_2024-Update
PSME_00005798-RA No alias (at3g17630 : 375.0) member of Putative Na+/H+ antiporter... 0.04 Orthogroups_2024-Update
PSME_00009262-RA No alias (at3g17630 : 267.0) member of Putative Na+/H+ antiporter... 0.01 Orthogroups_2024-Update
PSME_00015009-RA No alias (at5g41610 : 271.0) member of Putative Na+/H+ antiporter... 0.04 Orthogroups_2024-Update
PSME_00051620-RA No alias (at3g17630 : 352.0) member of Putative Na+/H+ antiporter... 0.02 Orthogroups_2024-Update
Sobic.001G027900.1 No alias proton 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA InterProScan predictions
MF GO:0015299 solute:proton antiporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006153 Cation/H_exchanger 17 178
No external refs found!