PSME_00006094-RA

Description : (at4g23180 : 401.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8l4h4|nork_medtr : 205.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 802.0) & (original description: no original description)

Gene families : OG_42_0000062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00006094-RA
Cluster	HCCA clusters: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
At4g05200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25...	0.03	Orthogroups_2024-Update
At4g21410	No alias	Cysteine-rich receptor-like protein kinase 29...	0.04	Orthogroups_2024-Update
At4g23310	No alias	Putative cysteine-rich receptor-like protein kinase 23...	0.04	Orthogroups_2024-Update
Bradi1g25552	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.04	Orthogroups_2024-Update
Bradi1g25612	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.04	Orthogroups_2024-Update
Bradi3g53070	No alias	S-locus lectin protein kinase family protein	0.03	Orthogroups_2024-Update
Brara.A01174.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.A01356.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Brara.K01761.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
GRMZM2G076943	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	0.03	Orthogroups_2024-Update
GRMZM2G140721	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.02	Orthogroups_2024-Update
GRMZM2G140752	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.02	Orthogroups_2024-Update
GRMZM2G378452	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 41	0.04	Orthogroups_2024-Update
Glyma.10G253800	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.02	Orthogroups_2024-Update
Glyma.20G137500	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.02	Orthogroups_2024-Update
Glyma.20G138500	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.05	Orthogroups_2024-Update
Glyma.20G138600	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.02	Orthogroups_2024-Update
Glyma.20G139200	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.03	Orthogroups_2024-Update
Glyma.20G139300	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.03	Orthogroups_2024-Update
Glyma.20G139700	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.03	Orthogroups_2024-Update
Glyma.20G139900	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.03	Orthogroups_2024-Update
HORVU2Hr1G044520.4	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.04	Orthogroups_2024-Update
HORVU2Hr1G044680.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.07	Orthogroups_2024-Update
HORVU2Hr1G125180.2	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU2Hr1G125250.2	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
LOC_Os07g35390	No alias	TKL_IRAK_DUF26-lc.17 - DUF26 kinases have homology to...	0.02	Orthogroups_2024-Update
LOC_Os07g35740	No alias	TKL_IRAK_DUF26-ld.2 - DUF26 kinases have homology to...	0.03	Orthogroups_2024-Update
MA_10237752g0010	No alias	(at4g23180 : 428.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
MA_10426030g0040	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10604g0010	No alias	(at4g38830 : 431.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
MA_130500g0010	No alias	(at4g23180 : 311.0) Encodes a receptor-like protein...	0.02	Orthogroups_2024-Update
MA_15696g0010	No alias	(at4g23180 : 380.0) Encodes a receptor-like protein...	0.02	Orthogroups_2024-Update
MA_212168g0010	No alias	(at4g23190 : 290.0) Encodes putative receptor-like...	0.04	Orthogroups_2024-Update
MA_426743g0010	No alias	(at1g61480 : 229.0) S-locus lectin protein kinase family...	0.04	Orthogroups_2024-Update
MA_9861293g0010	No alias	(at1g70740 : 274.0) Protein kinase superfamily protein;...	0.02	Orthogroups_2024-Update
PSME_00002857-RA	No alias	(at4g05200 : 403.0) Encodes a cysteine-rich...	0.03	Orthogroups_2024-Update
PSME_00011850-RA	No alias	(at4g23180 : 410.0) Encodes a receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00016499-RA	No alias	(at4g23140 : 428.0) Arabidopsis thaliana receptor-like...	0.09	Orthogroups_2024-Update
PSME_00040933-RA	No alias	(at4g23140 : 374.0) Arabidopsis thaliana receptor-like...	0.04	Orthogroups_2024-Update
PSME_00043043-RA	No alias	(at4g23180 : 424.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00043326-RA	No alias	(at4g23180 : 419.0) Encodes a receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00046993-RA	No alias	(at4g23180 : 277.0) Encodes a receptor-like protein...	0.05	Orthogroups_2024-Update
Potri.004G025650	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	0.04	Orthogroups_2024-Update
Potri.004G025800	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 25	0.03	Orthogroups_2024-Update
Potri.004G026350	No alias	cysteine-rich RLK (RECEPTOR-like protein kinase) 29	0.02	Orthogroups_2024-Update
Pp1s235_114V6	No alias	atp binding	0.02	Orthogroups_2024-Update
Sobic.009G181200.1	No alias	DUF26 protein kinase & EC_2.7 transferase transferring...	0.05	Orthogroups_2024-Update
Sopen02g024790	No alias	Protein tyrosine kinase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002902	GNK2	168	251
IPR002902	GNK2	45	138
IPR000719	Prot_kinase_dom	360	627

External Links

No external refs found!

PSME_00006094-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation