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  5. PSME_00006096-RA

PSME_00006096-RA


Description : (at4g23180 : 388.0) Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307); cysteine-rich RLK (RECEPTOR-like protein kinase) 10 (CRK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 124145 Blast hits to 122467 proteins in 4564 species: Archae - 110; Bacteria - 14159; Metazoa - 45299; Fungi - 10862; Plants - 34986; Viruses - 473; Other Eukaryotes - 18256 (source: NCBI BLink). & (q8l4h4|nork_medtr : 204.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 776.0) & (original description: no original description)


Gene families : OG_42_0000062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006096-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
27379 No alias Leucine-rich repeat transmembrane protein kinase 0.05 Orthogroups_2024-Update
At1g70740 No alias At1g70740 [Source:UniProtKB/TrEMBL;Acc:B4F7N6] 0.02 Orthogroups_2024-Update
At3g45860 No alias Cysteine-rich receptor-like protein kinase 4... 0.02 Orthogroups_2024-Update
At4g23130 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 5... 0.02 Orthogroups_2024-Update
At4g23310 No alias Putative cysteine-rich receptor-like protein kinase 23... 0.04 Orthogroups_2024-Update
Bradi1g12377 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 10 0.04 Orthogroups_2024-Update
Bradi1g12410 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 10 0.02 Orthogroups_2024-Update
Bradi2g01937 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 41 0.02 Orthogroups_2024-Update
Bradi3g53070 No alias S-locus lectin protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g29930 No alias Protein kinase superfamily protein 0.01 Orthogroups_2024-Update
Brara.A01239.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.A01326.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Brara.C04656.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.C04657.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Brara.C04658.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Brara.G02994.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
GRMZM2G140721 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0.05 Orthogroups_2024-Update
GRMZM2G140752 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0.03 Orthogroups_2024-Update
GRMZM2G378452 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 41 0.02 Orthogroups_2024-Update
Glyma.20G137500 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 29 0.03 Orthogroups_2024-Update
Glyma.20G137700 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 29 0.02 Orthogroups_2024-Update
Glyma.20G138600 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 29 0.03 Orthogroups_2024-Update
Glyma.20G138700 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 29 0.03 Orthogroups_2024-Update
Glyma.20G139700 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0.04 Orthogroups_2024-Update
Glyma.20G139900 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 10 0.04 Orthogroups_2024-Update
HORVU1Hr1G001220.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
HORVU1Hr1G074310.4 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
HORVU2Hr1G030320.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
HORVU2Hr1G044600.19 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G044640.4 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
HORVU2Hr1G044650.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
HORVU2Hr1G044680.2 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
HORVU2Hr1G125250.2 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
LOC_Os07g35290 No alias TKL_IRAK_DUF26-lc.10 - DUF26 kinases have homology to... 0.02 Orthogroups_2024-Update
LOC_Os07g35310 No alias TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
LOC_Os07g35370 No alias TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
LOC_Os07g35390 No alias TKL_IRAK_DUF26-lc.17 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
LOC_Os07g35660 No alias TKL_IRAK_DUF26-lc.21 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
LOC_Os07g35740 No alias TKL_IRAK_DUF26-ld.2 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
LOC_Os07g35810 No alias TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to... 0.03 Orthogroups_2024-Update
MA_10237752g0010 No alias (at4g23180 : 428.0) Encodes a receptor-like protein... 0.03 Orthogroups_2024-Update
MA_10428905g0010 No alias (at3g22060 : 110.0) contains Pfam profile: PF01657... 0.02 Orthogroups_2024-Update
MA_10430478g0010 No alias (at4g21390 : 318.0) B120; FUNCTIONS IN: protein... 0.02 Orthogroups_2024-Update
MA_10432964g0020 No alias (at4g23180 : 306.0) Encodes a receptor-like protein... 0.03 Orthogroups_2024-Update
MA_212168g0010 No alias (at4g23190 : 290.0) Encodes putative receptor-like... 0.05 Orthogroups_2024-Update
MA_28286g0010 No alias (at4g23160 : 436.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
MA_285982g0010 No alias (at1g70740 : 230.0) Protein kinase superfamily protein;... 0.05 Orthogroups_2024-Update
MA_28683g0010 No alias (at4g23160 : 349.0) Encodes a cysteine-rich... 0.02 Orthogroups_2024-Update
MA_9861293g0010 No alias (at1g70740 : 274.0) Protein kinase superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00002857-RA No alias (at4g05200 : 403.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00003839-RA No alias (at4g23180 : 356.0) Encodes a receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00008092-RA No alias (at1g11350 : 259.0) S-domain-1 13 (SD1-13); CONTAINS... 0.05 Orthogroups_2024-Update
PSME_00011850-RA No alias (at4g23180 : 410.0) Encodes a receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00015154-RA No alias (at4g23180 : 417.0) Encodes a receptor-like protein... 0.06 Orthogroups_2024-Update
PSME_00031875-RA No alias (at4g23180 : 430.0) Encodes a receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00038664-RA No alias (at4g23140 : 397.0) Arabidopsis thaliana receptor-like... 0.03 Orthogroups_2024-Update
PSME_00040303-RA No alias (at4g23180 : 466.0) Encodes a receptor-like protein... 0.06 Orthogroups_2024-Update
PSME_00040389-RA No alias (at4g23150 : 443.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00043043-RA No alias (at4g23180 : 424.0) Encodes a receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00043326-RA No alias (at4g23180 : 419.0) Encodes a receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00043466-RA No alias (at4g23160 : 326.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00044023-RA No alias (at4g23180 : 425.0) Encodes a receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00044921-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.004G025650 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 10 0.05 Orthogroups_2024-Update
Potri.004G026000 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 25 0.03 Orthogroups_2024-Update
Potri.004G026350 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 29 0.03 Orthogroups_2024-Update
Potri.007G120900 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.03 Orthogroups_2024-Update
Potri.008G132300 No alias Protein kinase superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G293100.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.2G201600.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.2G341300.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G086900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.5G203200.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.003G088100.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.005G175500.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G175600.1 No alias DUF26 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Solyc02g079710 No alias Serine/threonine-protein kinase (AHRD V3.3 *** K4B9J2_SOLLC) 0.04 Orthogroups_2024-Update
Solyc07g053100 No alias Serine/threonine-protein kinase (AHRD V3.3 *** U5FEZ9_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 372 638
IPR002902 GNK2 167 254
IPR002902 GNK2 45 139
No external refs found!