PSME_00006230-RA

Description : (at3g14050 : 664.0) RELA/SPOT homolog 2 (RSH2); CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607), RelA/SpoT (InterPro:IPR007685); BEST Arabidopsis thaliana protein match is: RELA/SPOT homolog 3 (TAIR:AT1G54130.1); Has 12447 Blast hits to 12322 proteins in 2456 species: Archae - 4; Bacteria - 8610; Metazoa - 164; Fungi - 55; Plants - 218; Viruses - 2; Other Eukaryotes - 3394 (source: NCBI BLink). & (reliability: 1328.0) & (original description: no original description)

Gene families : OG_42_0003311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003311_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00006230-RA
Cluster	HCCA clusters: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
Brara.F00068.1	No alias	bifunctional ppGpp synthetase and hydrolase *(RSH)	0.02	Orthogroups_2024-Update
HORVU2Hr1G031740.4	No alias	bifunctional ppGpp synthetase and hydrolase *(RSH)	0.05	Orthogroups_2024-Update
HORVU5Hr1G061710.2	No alias	bifunctional ppGpp synthetase and hydrolase *(RSH)	0.03	Orthogroups_2024-Update
MA_1897g0010	No alias	(at3g14050 : 708.0) RELA/SPOT homolog 2 (RSH2); CONTAINS...	0.03	Orthogroups_2024-Update
PSME_00004742-RA	No alias	(at3g14050 : 738.0) RELA/SPOT homolog 2 (RSH2); CONTAINS...	0.05	Orthogroups_2024-Update
Potri.001G168200	No alias	RELA/SPOT homolog 3	0.03	Orthogroups_2024-Update
Seita.2G220800.1	No alias	bifunctional ppGpp synthetase and hydrolase *(RSH)	0.03	Orthogroups_2024-Update
Sobic.002G217400.1	No alias	bifunctional ppGpp synthetase and hydrolase *(RSH)	0.03	Orthogroups_2024-Update
Sopen03g041150	No alias	HD domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009119	ribonucleoside metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	InterProScan predictions
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042278	purine nucleoside metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046128	purine ribonucleoside metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901068	guanosine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	415	525
IPR003607	HD/PDEase_dom	202	357

External Links

No external refs found!

PSME_00006230-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation