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  5. PSME_00006304-RA

PSME_00006304-RA


Description : (at1g69550 : 109.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006304-RA
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G264300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.06G310000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.09G161400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G210800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.16G214100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
MA_10436643g0010 No alias (at5g44510 : 305.0) Encodes TAO1 (Target of AvrB... 0.03 Orthogroups_2024-Update
MA_10436731g0020 No alias (at5g36930 : 140.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_30664g0020 No alias (at5g36930 : 82.8) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_390667g0010 No alias (at5g36930 : 227.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_741636g0010 No alias (at1g27170 : 144.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
MA_746330g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_8307592g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_83092g0010 No alias (at5g36930 : 102.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00008085-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00017101-RA No alias (at5g36930 : 209.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.012G135700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T077200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!