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  5. PSME_00006325-RA

PSME_00006325-RA


Description : (at3g06060 : 162.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G19200.1); Has 110611 Blast hits to 110370 proteins in 3576 species: Archae - 917; Bacteria - 74698; Metazoa - 5725; Fungi - 6415; Plants - 2635; Viruses - 0; Other Eukaryotes - 20221 (source: NCBI BLink). & (reliability: 324.0) & (original description: no original description)


Gene families : OG_42_0001397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006325-RA
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
Kfl00004_0370 kfl00004_0370_v1.1 (at3g06060 : 132.0) NAD(P)-binding Rossmann-fold... 0.02 Orthogroups_2024-Update
MA_172106g0010 No alias (at3g06060 : 144.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_18262g0020 No alias (at3g06060 : 129.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00002766-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00029587-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00041189-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Pp1s10_1V6 No alias follicular lymphoma variant translocation 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 39 236
No external refs found!