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PSME_00006415-RA


Description : (at2g45500 : 107.0) AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G27120.1); Has 35832 Blast hits to 33399 proteins in 3215 species: Archae - 1489; Bacteria - 15370; Metazoa - 4981; Fungi - 3599; Plants - 2905; Viruses - 24; Other Eukaryotes - 7464 (source: NCBI BLink). & (reliability: 214.0) & (original description: no original description)


Gene families : OG_42_0002633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002633_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006415-RA
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g34160 No alias CAF1 family ribonuclease containing protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!