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  5. PSME_00006468-RA

PSME_00006468-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000325 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006468-RA
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
100874 No alias Chaperone DnaJ-domain superfamily protein 0.03 Orthogroups_2024-Update
At2g17880 No alias At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828] 0.03 Orthogroups_2024-Update
Brara.A00245.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.K01330.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G180100 No alias DNAJ-like 20 0.03 Orthogroups_2024-Update
Glyma.08G180300 No alias DNAJ-like 20 0.03 Orthogroups_2024-Update
Glyma.12G030700 No alias Chaperone DnaJ-domain superfamily protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G057330.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10427494g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_17807g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_19658g0010 No alias (at2g17880 : 87.8) Chaperone DnaJ-domain superfamily... 0.06 Orthogroups_2024-Update
MA_41080g0010 No alias (at4g36040 : 84.3) Chaperone DnaJ-domain superfamily... 0.04 Orthogroups_2024-Update
MA_4924300g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_56308g0010 No alias (at2g17880 : 92.8) Chaperone DnaJ-domain superfamily... 0.03 Orthogroups_2024-Update
MA_696786g0010 No alias (at2g17880 : 95.5) Chaperone DnaJ-domain superfamily... 0.06 Orthogroups_2024-Update
Potri.004G172300 No alias Chaperone DnaJ-domain superfamily protein 0.03 Orthogroups_2024-Update
Pp1s91_206V6 No alias chaperone protein 0.04 Orthogroups_2024-Update
Seita.4G131600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G471400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 79 143
No external refs found!