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  5. PSME_00006478-RA

PSME_00006478-RA


Description : (at3g63240 : 452.0) DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: CVP2 like 1 (TAIR:AT2G32010.2); Has 2363 Blast hits to 2040 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 816; Fungi - 600; Plants - 662; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink). & (reliability: 904.0) & (original description: no original description)


Gene families : OG_42_0000152 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006478-RA
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Bradi1g13047 No alias CVP2 like 1 0.03 Orthogroups_2024-Update
Bradi1g55760 No alias DNAse I-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00923.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.03 Orthogroups_2024-Update
Brara.B00158.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.03 Orthogroups_2024-Update
Brara.B03933.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.02 Orthogroups_2024-Update
Glyma.09G285200 No alias DNAse I-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G076200 No alias CVP2 like 1 0.02 Orthogroups_2024-Update
Glyma.17G153000 No alias myo-inositol polyphosphate 5-phosphatase 2 0.04 Orthogroups_2024-Update
HORVU4Hr1G073350.1 No alias type-I inositol-polyphosphate 5-phosphatase & EC_3.1... 0.02 Orthogroups_2024-Update
PSME_00033184-RA No alias (at2g37440 : 336.0) DNAse I-like superfamily protein;... 0.04 Orthogroups_2024-Update
PSME_00033809-RA No alias (at3g63240 : 505.0) DNAse I-like superfamily protein;... 0.03 Orthogroups_2024-Update
Solyc06g072400 No alias TBP-associated factor 2 (AHRD V3.3 --* AT1G73960.2) 0.03 Orthogroups_2024-Update
Solyc09g005690 No alias Type I inositol-1,4,5-trisphosphate 5-phosphatase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 113 533
No external refs found!