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  5. PSME_00006523-RA

PSME_00006523-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0005621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006523-RA
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g66340 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00000329-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00049862-RA No alias (at3g55990 : 136.0) Encodes ESK1 (Eskimo1). A member of... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000098 sulfur amino acid catabolic process IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030328 prenylcysteine catabolic process IEP Predicted GO
BP GO:0030329 prenylcysteine metabolic process IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 64 116
No external refs found!