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  5. PSME_00006552-RA

PSME_00006552-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006552-RA
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
PSME_00002881-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00008167-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00009430-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012765-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00014612-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00015206-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00022903-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00034499-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00037006-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00053540-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!