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  5. PSME_00006676-RA

PSME_00006676-RA


Description : (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). & (q8lq92|gun3_orysa : 355.0) Endoglucanase 3 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 3) (OsGLU8) - Oryza sativa (Rice) & (reliability: 726.0) & (original description: no original description)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006676-RA
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_18847 No alias endoglucanase 6 0.02 Orthogroups_2024-Update
A4A49_19880 No alias endoglucanase 8 0.02 Orthogroups_2024-Update
At1g22880 No alias Endoglucanase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q2V4L8] 0.06 Orthogroups_2024-Update
At1g71380 No alias Endoglucanase [Source:UniProtKB/TrEMBL;Acc:Q0V7W1] 0.01 Orthogroups_2024-Update
At4g09740 No alias Endoglucanase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ90] 0.02 Orthogroups_2024-Update
At4g11050 No alias Endoglucanase 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7I0] 0.02 Orthogroups_2024-Update
At4g38990 No alias Endoglucanase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVJ4] 0.01 Orthogroups_2024-Update
At4g39000 No alias Endoglucanase 23 [Source:UniProtKB/Swiss-Prot;Acc:Q8GY58] 0.01 Orthogroups_2024-Update
Bradi1g54580 No alias cellulase 2 0.06 Orthogroups_2024-Update
Bradi4g36240 No alias glycosyl hydrolase 9B7 0.01 Orthogroups_2024-Update
Brara.I01325.1 No alias class-C endo-1,4-beta-glucanase 0.01 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.01 Orthogroups_2024-Update
Brara.I05558.1 No alias class-B endo-1,4-beta-glucanase 0.01 Orthogroups_2024-Update
GRMZM2G143747 No alias glycosyl hydrolase 9C2 0.04 Orthogroups_2024-Update
GRMZM2G154678 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Glyma.02G016400 No alias glycosyl hydrolase 9B13 0.04 Orthogroups_2024-Update
Glyma.05G236400 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Glyma.06G056700 No alias glycosyl hydrolase 9A4 0.02 Orthogroups_2024-Update
Glyma.09G231800 No alias glycosyl hydrolase 9B1 0.01 Orthogroups_2024-Update
Glyma.14G019900 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
HORVU7Hr1G075970.1 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os01g21070 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g57860 No alias endoglucanase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g29770 No alias endoglucanase, putative, expressed 0.01 Orthogroups_2024-Update
MA_10431918g0010 No alias (q69nf5|gun23_orysa : 580.0) Endoglucanase 23 precursor... 0.01 Orthogroups_2024-Update
MA_16152g0010 No alias (at4g02290 : 718.0) glycosyl hydrolase 9B13 (GH9B13);... 0.01 Orthogroups_2024-Update
MA_195523g0010 No alias (at3g43860 : 298.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
PSME_00004751-RA No alias (at1g02800 : 318.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00007066-RA No alias (at1g02800 : 663.0) Encodes a protein with similarity to... 0.08 Orthogroups_2024-Update
PSME_00013360-RA No alias (at1g02800 : 658.0) Encodes a protein with similarity to... 0.01 Orthogroups_2024-Update
PSME_00014943-RA No alias (at4g02290 : 426.0) glycosyl hydrolase 9B13 (GH9B13);... 0.04 Orthogroups_2024-Update
PSME_00016234-RA No alias (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... 0.03 Orthogroups_2024-Update
PSME_00024924-RA No alias (at4g02290 : 664.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00025737-RA No alias (at4g11050 : 499.0) glycosyl hydrolase 9C3 (GH9C3);... 0.01 Orthogroups_2024-Update
PSME_00027441-RA No alias (at4g11050 : 477.0) glycosyl hydrolase 9C3 (GH9C3);... 0.01 Orthogroups_2024-Update
PSME_00029529-RA No alias (at1g64390 : 682.0) glycosyl hydrolase 9C2 (GH9C2);... 0.02 Orthogroups_2024-Update
PSME_00041194-RA No alias (at1g23210 : 550.0) glycosyl hydrolase 9B6 (GH9B6);... 0.01 Orthogroups_2024-Update
PSME_00042047-RA No alias (at1g02800 : 369.0) Encodes a protein with similarity to... 0.01 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.01 Orthogroups_2024-Update
Potri.001G098800 No alias glycosyl hydrolase 9B14 0.02 Orthogroups_2024-Update
Potri.001G356000 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Potri.005G237700 No alias glycosyl hydrolase 9B5 0.01 Orthogroups_2024-Update
Potri.014G126900 No alias glycosyl hydrolase 9B13 0.01 Orthogroups_2024-Update
Potri.019G069300 No alias cellulase 3 0.02 Orthogroups_2024-Update
Pp1s100_137V6 No alias endo- -beta- 0.04 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.1G339700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G284400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G148500.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Sobic.004G021400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G244600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G090900.1 No alias class-B endo-1,4-beta-glucanase 0.05 Orthogroups_2024-Update
Sobic.007G119300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.009G029800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc08g083210 No alias endo-1,4-beta-glucanase (cel5) 0.01 Orthogroups_2024-Update
Solyc11g040340 No alias LEE14BDGL L.esculentum endo-1,4-beta-D-glucanase 0.04 Orthogroups_2024-Update
Sopen08g030520 No alias Glycosyl hydrolase family 9 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 48 176
No external refs found!