1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00006781-RA

PSME_00006781-RA


Description : (at1g22730 : 96.7) MA3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2); Has 2025 Blast hits to 776 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 1297; Fungi - 8; Plants - 551; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink). & (reliability: 193.4) & (original description: no original description)


Gene families : OG_42_0001101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006781-RA
Cluster HCCA clusters: Cluster_370

Target Alias Description ECC score Gene Family Method Actions
PSME_00001872-RA No alias (at4g24800 : 474.0) MA3 domain-containing protein;... 0.03 Orthogroups_2024-Update
PSME_00003998-RA No alias (at4g24800 : 238.0) MA3 domain-containing protein;... 0.01 Orthogroups_2024-Update
PSME_00007003-RA No alias (at3g48390 : 352.0) MA3 domain-containing protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!