1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00006820-RA

PSME_00006820-RA


Description : (at1g02850 : 496.0) beta glucosidase 11 (BGLU11); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 10 (TAIR:AT4G27830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p49235|bglc_maize : 377.0) Beta-glucosidase, chloroplast precursor (EC 3.2.1.21) (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) - Zea mays (Maize) & (reliability: 992.0) & (original description: no original description)


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006820-RA
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
88863 No alias beta glucosidase 40 0.03 Orthogroups_2024-Update
A4A49_37513 No alias beta-glucosidase 11 0.02 Orthogroups_2024-Update
GRMZM2G031660 No alias beta glucosidase 46 0.03 Orthogroups_2024-Update
Mp2g13770.1 No alias Beta-glucosidase 11 OS=Oryza sativa subsp. japonica... 0.02 Orthogroups_2024-Update
Sobic.010G233900.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 24 506
No external refs found!